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biopet.biopet
Commits
8ff5c10a
Commit
8ff5c10a
authored
Jul 11, 2017
by
Peter van 't Hof
Browse files
Remove unused method
parent
f2849b27
Changes
1
Hide whitespace changes
Inline
Side-by-side
biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/gatk/CommandLineGATK.scala
View file @
8ff5c10a
...
...
@@ -418,11 +418,3 @@ trait CommandLineGATK extends BiopetJavaCommandLineFunction with Reference with
optional
(
"-l"
,
logging_level
,
spaceSeparated
=
true
,
escape
=
true
,
format
=
"%s"
)
+
optional
(
"-log"
,
log_to_file
,
spaceSeparated
=
true
,
escape
=
true
,
format
=
"%s"
)
}
object
CommandLineGATK
{
def
isFileWithTag
(
file
:
File
,
tag
:
String
)
:
Boolean
=
file
match
{
case
f
:
TaggedFile
=>
f
.
tag
==
tag
case
_
=>
false
}
}
\ No newline at end of file
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