Commit 8fe61b60 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fixed test

parent 3a2a8d36
...@@ -53,8 +53,12 @@ class ShivaVariantcallingTest extends TestNGSuite with Matchers { ...@@ -53,8 +53,12 @@ class ShivaVariantcallingTest extends TestNGSuite with Matchers {
haplotypeCallerAllele <- bool; haplotypeCallerAllele <- bool;
unifiedGenotyperAllele <- bool; unifiedGenotyperAllele <- bool;
unifiedGenotyper <- bool; unifiedGenotyper <- bool;
haplotypeCaller <- bool haplotypeCaller <- bool;
) yield Array[Any](bams, raw, bcftools, bcftools_singlesample, unifiedGenotyper, haplotypeCaller, haplotypeCallerGvcf, haplotypeCallerAllele, unifiedGenotyperAllele) freebayes <- bool;
varscanCnsSinglesample <- bool
) yield Array[Any](bams, raw, bcftools, bcftools_singlesample, unifiedGenotyper,
haplotypeCaller, haplotypeCallerGvcf, haplotypeCallerAllele, unifiedGenotyperAllele,
freebayes, varscanCnsSinglesample)
).toArray ).toArray
} }
......
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