From 8eec38276ddafa6b3e26ff2fd6dce82478a8d4e9 Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Mon, 27 Jul 2015 13:53:35 +0200
Subject: [PATCH] Raise memory
---
.../src/main/scala/nl/lumc/sasc/biopet/tools/VcfFilter.scala | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VcfFilter.scala b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VcfFilter.scala
index b983cb8e3..92e82b968 100644
--- a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VcfFilter.scala
+++ b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VcfFilter.scala
@@ -42,7 +42,7 @@ class VcfFilter(val root: Configurable) extends ToolCommandFuntion {
var minSamplesPass: Option[Int] = config("min_samples_pass")
var filterRefCalls: Boolean = config("filter_ref_calls", default = false)
- override def defaultCoreMemory = 1.0
+ override def defaultCoreMemory = 3.0
override def commandLine = super.commandLine +
required("-I", inputVcf) +
--
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