diff --git a/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/MultiSampleQScript.scala b/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/MultiSampleQScript.scala index c1cace9c598ed3e5dbf77dad691f60fbcb47aecf..0feeb30704a9ecd1e3964fa1317f15ad49fbc08d 100644 --- a/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/MultiSampleQScript.scala +++ b/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/MultiSampleQScript.scala @@ -145,7 +145,7 @@ trait MultiSampleQScript extends SummaryQScript { qscript: QScript => ConfigUtils.getMapFromPath(globalConfig.map, List("samples", sampleId, "libraries")).getOrElse(Map()).keySet } catch { case e: IllegalStateException if e.getMessage == "Value is not a map: library" => - Logging.addError("libraries is not a map") + Logging.addError("libraries for samples are not formatted correctly") Set() } if (ids.isEmpty) {