From 86572f2692ec93abea37cca97a2b6f65527877f9 Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Tue, 20 Sep 2016 13:58:23 +0200
Subject: [PATCH] rename krona html file
---
.../nl/lumc/sasc/biopet/pipelines/gears/krakenKrona.ssp | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/gears/src/main/resources/nl/lumc/sasc/biopet/pipelines/gears/krakenKrona.ssp b/gears/src/main/resources/nl/lumc/sasc/biopet/pipelines/gears/krakenKrona.ssp
index eb19b30d6..99162c95b 100644
--- a/gears/src/main/resources/nl/lumc/sasc/biopet/pipelines/gears/krakenKrona.ssp
+++ b/gears/src/main/resources/nl/lumc/sasc/biopet/pipelines/gears/krakenKrona.ssp
@@ -26,10 +26,10 @@
args ++ Map("kronaXml" -> tempFile))
- val file = new File(outputDir, "kraken_krona.html")
+ val file = new File(outputDir, s"$summaryModuleTag-$summaryStatsTag.html")
val writer = new PrintWriter(file)
writer.println(output)
writer.close()
%>
-<iframe src="kraken_krona.html" style="width:100%;height:80vh;border:none;"></iframe>
+<iframe src="${summaryModuleTag}-${summaryStatsTag}.html" style="width:100%;height:80vh;border:none;"></iframe>
--
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