From 83dfaffeea38523ba5939171b79786b4a31d6488 Mon Sep 17 00:00:00 2001 From: Ioannis Moustakas <i.moustakas@lumc.nl> Date: Wed, 13 Jul 2016 17:42:42 +0200 Subject: [PATCH] Improved phrasing --- docs/tools/FindRepeatsPacBio.md | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/docs/tools/FindRepeatsPacBio.md b/docs/tools/FindRepeatsPacBio.md index 02351d091..6aebc65c2 100644 --- a/docs/tools/FindRepeatsPacBio.md +++ b/docs/tools/FindRepeatsPacBio.md @@ -1,9 +1,10 @@ # FindRepeatsPacBio ## Introduction -This tool looks and annotates repeat regions inside a BAM file. It extracts the regions of interest from a bed file and then intersects -those regions with the BAM file. On those extracted regions the tool will perform a - Mpileup and counts all insertions/deletions etc. etc. for that specific location on a per read basis. +This tool searches for and annotates repeat regions inside a BAM file. +It intersect the regions provided in the bed file with the BAM file and extracts them. +On the extracted regions *samtools mpileup* will be run and all insertions, deletions or substitutions will be counted on a per read basis + ## Example -- GitLab