Change logging type

831f9ae4 · Peter van 't Hof · b10bad38 · 831f9ae4
Commit 831f9ae4 authored Dec 10, 2016 by Peter van 't Hof
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biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/ValidateVcf.scala ...rc/main/scala/nl/lumc/sasc/biopet/tools/ValidateVcf.scala +1 -1

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--- a/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/ValidateVcf.scala
+++ b/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/ValidateVcf.scala
@@ -56,7 +56,7 @@ object ValidateVcf extends ToolCommand {
    } catch {
      case e: IllegalArgumentException =>
        if (cmdArgs.failOnError) throw e
-        else logger.warn(e.getMessage)
+        else logger.error(e.getMessage)
    }

    vcfReader.close()