From 817341c6424c3db45710921ed751617c682e947d Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Tue, 19 Jul 2016 14:38:22 +0200
Subject: [PATCH] Added text to args
---
.../src/main/scala/nl/lumc/sasc/biopet/tools/VcfToTsv.scala | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/VcfToTsv.scala b/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/VcfToTsv.scala
index 3597d398c..01c17027d 100644
--- a/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/VcfToTsv.scala
+++ b/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/VcfToTsv.scala
@@ -34,7 +34,7 @@ object VcfToTsv extends ToolCommand {
class OptParser extends AbstractOptParser {
opt[File]('I', "inputFile") required () maxOccurs 1 valueName "<file>" action { (x, c) =>
c.copy(inputFile = x)
- }
+ } text "Input vcf file"
opt[File]('o', "outputFile") maxOccurs 1 valueName "<file>" action { (x, c) =>
c.copy(outputFile = x)
} text "output file, default to stdout"
--
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