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biopet.biopet
Commits
7f45b476
Commit
7f45b476
authored
Apr 25, 2016
by
Peter van 't Hof
Browse files
Fixed try
parent
9c1b8526
Changes
1
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public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/VcfWithVcf.scala
View file @
7f45b476
...
...
@@ -79,7 +79,7 @@ object VcfWithVcf extends ToolCommand {
logger
.
info
(
"Init phase"
)
val
argsParser
=
new
OptParser
val
commandArgs
:
Args
=
argsParser
.
parse
(
args
,
Args
())
getOrElse
(
throw
new
IllegalArgumentException
)
val
commandArgs
:
Args
=
argsParser
.
parse
(
args
,
Args
())
getOrElse
(
throw
new
IllegalArgumentException
)
val
reader
=
new
VCFFileReader
(
commandArgs
.
inputFile
)
val
secondaryReader
=
new
VCFFileReader
(
commandArgs
.
secondaryVcf
)
...
...
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