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biopet.biopet
Commits
7e1ef164
Commit
7e1ef164
authored
Jun 17, 2015
by
Peter van 't Hof
Browse files
Change default memory
parent
f2472f2d
Changes
1
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public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaReport.scala
View file @
7e1ef164
...
...
@@ -14,6 +14,8 @@ import nl.lumc.sasc.biopet.pipelines.flexiprep.FlexiprepReport
*/
class
ShivaReport
(
val
root
:
Configurable
)
extends
ReportBuilderExtension
{
val
builder
=
ShivaReport
override
val
defaultCoreMemory
=
3.0
}
object
ShivaReport
extends
MultisampleReportBuilder
{
...
...
@@ -98,7 +100,7 @@ object ShivaReport extends MultisampleReportBuilder {
),
args
)
}
def
libraryPage
(
sampleId
:
String
,
libId
:
String
,
args
:
Map
[
String
,
Any
])
=
{
def
libraryPage
(
sampleId
:
String
,
libId
:
String
,
args
:
Map
[
String
,
Any
])
=
{
ReportPage
(
Map
(
"Alignment"
->
BammetricsReport
.
bamMetricsPage
(
summary
,
Some
(
sampleId
),
Some
(
libId
)),
"QC"
->
FlexiprepReport
.
flexiprepPage
...
...
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