Merge pull request #67 from biopet/CleverFixVCF

Clever fix vcf

biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala

@@ -112,6 +112,7 @@ object CleverFixVCF extends ToolCommand {
 ##INFO=<ID=DPADJ,Number=.,Type=Integer,Description="Read Depth of adjacency">
 ##INFO=<ID=CN,Number=1,Type=Integer,Description="Copy number of segment containing breakend">
 ##INFO=<ID=CNADJ,Number=.,Type=Integer,Description="Copy number of adjacency">
+##INFO=<ID=ESUPPORT,Number=1,Type=Float,Description="Support of event, see into clever python script for more: scripts/postprocess-predictions">
 ##INFO=<ID=CICN,Number=2,Type=Integer,Description="Confidence interval around copy number for the segment">
 ##INFO=<ID=CICNADJ,Number=.,Type=Integer,Description="Confidence interval around copy number for the adjacency">
 ##FORMAT=<ID=CN,Number=1,Type=Integer,Description="Copy number genotype for imprecise events">

biopet-extensions/src/test/resources/nl/lumc/sasc/biopet/extensions/clever/expectedresult.clever.vcf

@@ -28,6 +28,7 @@
 ##INFO=<ID=DPADJ,Number=.,Type=Integer,Description="Read Depth of adjacency">
 ##INFO=<ID=CN,Number=1,Type=Integer,Description="Copy number of segment containing breakend">
 ##INFO=<ID=CNADJ,Number=.,Type=Integer,Description="Copy number of adjacency">
+##INFO=<ID=ESUPPORT,Number=1,Type=Float,Description="Support of event, see into clever python script for more: scripts/postprocess-predictions">
 ##INFO=<ID=CICN,Number=2,Type=Integer,Description="Confidence interval around copy number for the segment">
 ##INFO=<ID=CICNADJ,Number=.,Type=Integer,Description="Confidence interval around copy number for the adjacency">
 ##FORMAT=<ID=CN,Number=1,Type=Integer,Description="Copy number genotype for imprecise events">