Commit 7a91b2c0 authored by Peter van 't Hof's avatar Peter van 't Hof

Fixed unit tests

parent 9cb93c59
......@@ -31,8 +31,8 @@ class PickClosedReferenceOtus(val root: Configurable) extends BiopetCommandLineF
var outputDir: File = null
override def defaultThreads = 3
override def defaultCoreMemory = 16.0
override def defaultThreads = 1
override def defaultCoreMemory = 20.0
def versionCommand = executable + " --version"
def versionRegex = """Version: (.*)""".r
......
......@@ -80,6 +80,7 @@ class GearsSingleTest extends TestNGSuite with Matchers {
), Map(GearsSingleTest.executables.toSeq: _*))
val gears: GearsSingle = initPipeline(map)
gears.sampleId = Some("x")
if (fromBam) {
gears.bamFile = Some(GearsSingleTest.bam)
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment