Commit 719894d1 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Summary is skipped in chunking mode

parent 2e45f064
......@@ -164,7 +164,7 @@ class Mapping(val root:Configurable) extends QScript with BiopetQScript {
if (!skipFlexiprep) {
flexiprep.input_R1 = fastq_R1
if (paired) flexiprep.input_R2 = fastq_R2
flexiprep.skipSummary = true
if (chunking) flexiprep.skipSummary = true
flexiprep.init
flexiprep.runInitialJobs
//flexiprep.biopetScript
......
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