Commit 6ced8ab1 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Rename

parent 6fa7f040
......@@ -247,7 +247,7 @@ object VcfStats extends ToolCommand {
logger.info("Done reading vcf records")
val allWriter = new PrintWriter(new File(cmdArgs.outputDir, "all.json"))
val allWriter = new PrintWriter(new File(cmdArgs.outputDir, "stats.json"))
val json = ConfigUtils.mapToJson(stats.getAllStats(FastaUtils.getCachedDict(cmdArgs.referenceFile).getSequences.map(_.getSequenceName).toList, samples, adGenotypeTags, adInfoTags, sampleDistributions))
allWriter.println(json.spaces2)
allWriter.close()
......
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