From 5c780aa959117cb7e1660a868fe6a5aa6567e156 Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Wed, 23 Sep 2015 20:44:43 +0200
Subject: [PATCH] Fix dir

---
 README.md     | 2 +-
 docs/index.md | 6 +++---
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/README.md b/README.md
index 2c0e06abf..f8f05d71c 100755
--- a/README.md
+++ b/README.md
@@ -65,7 +65,7 @@ To develop Biopet, Java 7, Maven 3.2.2, and GATK Queue 3.4 is required. Please c
 
 ~~~
 $ git clone https://github.com/broadgsa/gatk-protected
-$ cd gatk
+$ cd gatk-protected
 $ git checkout 3.4                              # the current release is based on GATK 3.4
 $ mvn -U clean install
 ~~~
diff --git a/docs/index.md b/docs/index.md
index f14457707..cadc709fa 100644
--- a/docs/index.md
+++ b/docs/index.md
@@ -65,9 +65,9 @@ To develop Biopet, Java 7, Maven 3.2.2, and GATK Queue 3.4 is required. Please c
 
 ~~~
 $ git clone https://github.com/broadgsa/gatk-protected
-$ cd gatk
+$ cd gatk-protected
 $ git checkout 3.4                              # the current release is based on GATK 3.4
-$ mvn -U clean install
+$ mvn clean install
 ~~~
 
 This will install all the required dependencies to your local maven repository. After this is done, you can clone our repository and test if everything builds fine:
@@ -75,7 +75,7 @@ This will install all the required dependencies to your local maven repository.
 ~~~
 $ git clone https://github.com/biopet/biopet.git
 $ cd biopet
-$ mvn -U clean install
+$ mvn clean install
 ~~~
 
 If everything builds fine, you're good to go! Otherwise, don't hesitate to contact us or file an issue at our issue tracker.
-- 
GitLab