Commit 5c4cdff6 authored by Sander van der Zeeuw's avatar Sander van der Zeeuw
Browse files

change mem limit

parent a4e47ce4
...@@ -176,7 +176,7 @@ class Mapping(val root: Configurable) extends QScript with SummaryQScript with S ...@@ -176,7 +176,7 @@ class Mapping(val root: Configurable) extends QScript with SummaryQScript with S
extractIfNeeded(input_R1, flexiprep.outputDir), extractIfNeeded(input_R1, flexiprep.outputDir),
if (paired) Some(extractIfNeeded(input_R2.get, outputDir)) else None) if (paired) Some(extractIfNeeded(input_R2.get, outputDir)) else None)
) )
} else Map(outputDir -> (input_R1, input_R2)) } else Map(outputDir -> (flexiprep.outputFiles("fastq_input_R1"), flexiprep.outputFiles.get("fastq_input_R2")))
} }
if (chunking) { if (chunking) {
......
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