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biopet.biopet
Commits
5aae754e
Commit
5aae754e
authored
Feb 26, 2015
by
Peter van 't Hof
Browse files
Remove unused imports
parent
0d7fce54
Changes
1
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public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/Shiva.scala
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5aae754e
package
nl.lumc.sasc.biopet.pipelines.shiva
import
htsjdk.samtools.SamReaderFactory
import
nl.lumc.sasc.biopet.core.config.Configurable
import
nl.lumc.sasc.biopet.core.summary.SummaryQScript
import
nl.lumc.sasc.biopet.core.
{
MultiSampleQScript
,
PipelineCommand
}
import
nl.lumc.sasc.biopet.extensions.Ln
import
nl.lumc.sasc.biopet.extensions.picard.
{
AddOrReplaceReadGroups
,
SamToFastq
,
MarkDuplicates
}
import
nl.lumc.sasc.biopet.pipelines.mapping.Mapping
import
nl.lumc.sasc.biopet.core.PipelineCommand
import
org.broadinstitute.gatk.queue.QScript
import
scala.collection.JavaConversions._
/**
* Created by pjvan_thof on 2/24/15.
...
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