From 5150c6c382e96b4f9d9b3d663909932a4fc31d30 Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Tue, 4 Nov 2014 09:29:08 +0100
Subject: [PATCH] Adding dirty warning
---
.../nl/lumc/sasc/biopet/core/BiopetExecutable.scala | 13 ++++++++++++-
1 file changed, 12 insertions(+), 1 deletion(-)
diff --git a/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutable.scala b/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutable.scala
index ea0098b9f..32cfbf1fc 100644
--- a/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutable.scala
+++ b/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutable.scala
@@ -1,8 +1,9 @@
package nl.lumc.sasc.biopet.core
import java.util.Properties
+import org.apache.log4j.Logger
-object BiopetExecutable {
+object BiopetExecutable extends Logging {
val modules: Map[String, List[MainCommand]] = Map(
"pipeline" -> List(
@@ -108,4 +109,14 @@ object BiopetExecutable {
prop.load(getClass.getClassLoader.getResourceAsStream("git.properties"))
prop.getProperty("git.commit.id.abbrev")
}
+
+ def checkDirtyBuild(logger: Logger) {
+ val prop = new Properties()
+ prop.load(getClass.getClassLoader.getResourceAsStream("git.properties"))
+ val describeShort = prop.getProperty("git.commit.id.describe-short")
+ if (describeShort.endsWith("-dirty")) {
+ logger.warn("This is a dirty build")
+ }
+ }
+ checkDirtyBuild(logger)
}
--
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