Commit 4245609f authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fixed arg bug

parent 35bd64d6
...@@ -33,7 +33,7 @@ class CentrifugeKreport(val root: Configurable) extends BiopetCommandLineFunctio ...@@ -33,7 +33,7 @@ class CentrifugeKreport(val root: Configurable) extends BiopetCommandLineFunctio
def cmdLine = executable + def cmdLine = executable +
conditional(onlyUnique, "--only-unique") + conditional(onlyUnique, "--only-unique") +
conditional(showZeros, "--show-zeros") + conditional(showZeros, "--show-zeros") +
conditional(showZeros, "--is-counts") + conditional(isCounts, "--is-counts") +
optional("--min-score=", minScore, spaceSeparated = false) + optional("--min-score=", minScore, spaceSeparated = false) +
optional("--min-length=", minLength, spaceSeparated = false) + optional("--min-length=", minLength, spaceSeparated = false) +
required("-x", index) + required("-x", index) +
......
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