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biopet.biopet
Commit 3b61a8de authored by Peter van 't Hof's avatar Peter van 't Hof
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Fixing tests

parent 73754420
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Showing with 2 additions and 2 deletions
biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/VcfStatsTest.scala
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......@@ -285,7 +285,7 @@ class VcfStatsTest extends TestNGSuite with Matchers {
general.get("Symbolic") shouldEqual Some(0)
general.get("SimpleInsertion") shouldEqual Some(1)
val total = blah("total")
val total = blah
total.get("SampleDistribution-NonInformative") shouldEqual Some(Map(0 -> 1))
total.get("SampleDistribution-Called") shouldEqual Some(Map(3 -> 1))
total.get("SampleDistribution-Mixed") shouldEqual Some(Map(0 -> 1))
......@@ -355,7 +355,7 @@ class VcfStatsTest extends TestNGSuite with Matchers {
general.get("Het") shouldEqual Some(1)
general.get("HetNonRef") shouldEqual Some(0)
val total = blah("total")
val total = blah
total.get("GQ") shouldEqual Some(Map(99 -> 1))
total.get("AD") shouldEqual Some(Map(24 -> 1, 21 -> 1))
total.get("AD-used") shouldEqual Some(Map(24 -> 1, 21 -> 1))
......
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