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biopet.biopet
Commits
3b61a8de
Commit
3b61a8de
authored
Jul 20, 2017
by
Peter van 't Hof
Browse files
Fixing tests
parent
73754420
Changes
1
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Inline
Side-by-side
biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/VcfStatsTest.scala
View file @
3b61a8de
...
...
@@ -285,7 +285,7 @@ class VcfStatsTest extends TestNGSuite with Matchers {
general
.
get
(
"Symbolic"
)
shouldEqual
Some
(
0
)
general
.
get
(
"SimpleInsertion"
)
shouldEqual
Some
(
1
)
val
total
=
blah
(
"total"
)
val
total
=
blah
total
.
get
(
"SampleDistribution-NonInformative"
)
shouldEqual
Some
(
Map
(
0
->
1
))
total
.
get
(
"SampleDistribution-Called"
)
shouldEqual
Some
(
Map
(
3
->
1
))
total
.
get
(
"SampleDistribution-Mixed"
)
shouldEqual
Some
(
Map
(
0
->
1
))
...
...
@@ -355,7 +355,7 @@ class VcfStatsTest extends TestNGSuite with Matchers {
general
.
get
(
"Het"
)
shouldEqual
Some
(
1
)
general
.
get
(
"HetNonRef"
)
shouldEqual
Some
(
0
)
val
total
=
blah
(
"total"
)
val
total
=
blah
total
.
get
(
"GQ"
)
shouldEqual
Some
(
Map
(
99
->
1
))
total
.
get
(
"AD"
)
shouldEqual
Some
(
Map
(
24
->
1
,
21
->
1
))
total
.
get
(
"AD-used"
)
shouldEqual
Some
(
Map
(
24
->
1
,
21
->
1
))
...
...
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