Skip to content

GitLab

B
biopet.biopet
Commit 3b0bc744 authored by Peter van 't Hof's avatar Peter van 't Hof Committed by GitHub
Browse files
Options

Merge branch 'develop' into fix-BIOPET-640

parents ce94a022 7a95865b
Show whitespace changes
Inline Side-by-side
Showing with 2 additions and 0 deletions
biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/clever/CleverFixVCF.scala
View file @ 3b0bc744
......@@ -112,6 +112,7 @@ object CleverFixVCF extends ToolCommand {
##INFO=<ID=DPADJ,Number=.,Type=Integer,Description="Read Depth of adjacency">
##INFO=<ID=CN,Number=1,Type=Integer,Description="Copy number of segment containing breakend">
##INFO=<ID=CNADJ,Number=.,Type=Integer,Description="Copy number of adjacency">
##INFO=<ID=ESUPPORT,Number=1,Type=Float,Description="Support of event, see into clever python script for more: scripts/postprocess-predictions">
##INFO=<ID=CICN,Number=2,Type=Integer,Description="Confidence interval around copy number for the segment">
##INFO=<ID=CICNADJ,Number=.,Type=Integer,Description="Confidence interval around copy number for the adjacency">
##FORMAT=<ID=CN,Number=1,Type=Integer,Description="Copy number genotype for imprecise events">
......
biopet-extensions/src/test/resources/nl/lumc/sasc/biopet/extensions/clever/expectedresult.clever.vcf
View file @ 3b0bc744
......@@ -28,6 +28,7 @@
##INFO=<ID=DPADJ,Number=.,Type=Integer,Description="Read Depth of adjacency">
##INFO=<ID=CN,Number=1,Type=Integer,Description="Copy number of segment containing breakend">
##INFO=<ID=CNADJ,Number=.,Type=Integer,Description="Copy number of adjacency">
##INFO=<ID=ESUPPORT,Number=1,Type=Float,Description="Support of event, see into clever python script for more: scripts/postprocess-predictions">
##INFO=<ID=CICN,Number=2,Type=Integer,Description="Confidence interval around copy number for the segment">
##INFO=<ID=CICNADJ,Number=.,Type=Integer,Description="Confidence interval around copy number for the adjacency">
##FORMAT=<ID=CN,Number=1,Type=Integer,Description="Copy number genotype for imprecise events">
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment