diff --git a/protected/basty/Basty.iml b/protected/basty/Basty.iml
index 4b3569203de42d51dbb731294b2f1f823e9f1d34..8c135e13d0bded344f4b94b85ac82fddeda18d51 100644
--- a/protected/basty/Basty.iml
+++ b/protected/basty/Basty.iml
@@ -93,5 +93,6 @@
<orderEntry type="module" module-name="Mapping" />
<orderEntry type="module" module-name="Flexiprep" />
<orderEntry type="module" module-name="BamMetrics" />
+ <orderEntry type="module" module-name="Bam2Wig" />
</component>
</module>
\ No newline at end of file
diff --git a/public/bam2wig/Bam2Wig.iml b/public/bam2wig/Bam2Wig.iml
new file mode 100644
index 0000000000000000000000000000000000000000..54fb966499dc08774dd77641ac8d9286ecddbc96
--- /dev/null
+++ b/public/bam2wig/Bam2Wig.iml
@@ -0,0 +1,92 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<module org.jetbrains.idea.maven.project.MavenProjectsManager.isMavenModule="true" type="JAVA_MODULE" version="4">
+ <component name="NewModuleRootManager" inherit-compiler-output="false">
+ <output url="file://$MODULE_DIR$/target/classes" />
+ <output-test url="file://$MODULE_DIR$/target/test-classes" />
+ <content url="file://$MODULE_DIR$">
+ <sourceFolder url="file://$MODULE_DIR$/src/main/resources" type="java-resource" />
+ <sourceFolder url="file://$MODULE_DIR$/src/main/scala" isTestSource="false" />
+ <excludeFolder url="file://$MODULE_DIR$/target" />
+ </content>
+ <orderEntry type="inheritedJdk" />
+ <orderEntry type="sourceFolder" forTests="false" />
+ <orderEntry type="module" module-name="BiopetFramework" />
+ <orderEntry type="library" name="Maven: org.scala-lang:scala-library:2.11.2" level="project" />
+ <orderEntry type="library" name="Maven: org.broadinstitute.gatk:gatk-queue:3.3" level="project" />
+ <orderEntry type="library" name="Maven: org.broadinstitute.gatk:gatk-tools-public:3.3" level="project" />
+ <orderEntry type="library" name="Maven: org.broadinstitute.gatk:gatk-engine:3.3" level="project" />
+ <orderEntry type="library" name="Maven: org.scala-lang:scala-compiler:2.10.2" level="project" />
+ <orderEntry type="library" name="Maven: org.scala-lang:scala-reflect:2.10.2" level="project" />
+ <orderEntry type="library" name="Maven: log4j:log4j:1.2.15" level="project" />
+ <orderEntry type="library" name="Maven: net.sf.jgrapht:jgrapht:0.8.3" level="project" />
+ <orderEntry type="library" name="Maven: org.apache.commons:commons-email:1.2" level="project" />
+ <orderEntry type="library" name="Maven: javax.activation:activation:1.1" level="project" />
+ <orderEntry type="library" name="Maven: javax.mail:mail:1.4.4" level="project" />
+ <orderEntry type="module-library">
+ <library name="Maven: com.sun:tools:1.4.2">
+ <CLASSES>
+ <root url="jar:///usr/lib/jvm/java-1.7.0-openjdk-amd64/lib/tools.jar!/" />
+ </CLASSES>
+ <JAVADOC />
+ <SOURCES />
+ </library>
+ </orderEntry>
+ <orderEntry type="library" name="Maven: org.broadinstitute.gatk:gatk-queue-extensions-distribution:3.3" level="project" />
+ <orderEntry type="library" name="Maven: org.broadinstitute.gatk:gatk-tools-protected:3.3" level="project" />
+ <orderEntry type="library" name="Maven: gov.nist.math:jama:1.0.2" level="project" />
+ <orderEntry type="library" scope="RUNTIME" name="Maven: org.broadinstitute.gatk:gatk-queue-extensions-generator:3.3" level="project" />
+ <orderEntry type="library" name="Maven: org.broadinstitute.gatk:gatk-utils:3.3" level="project" />
+ <orderEntry type="library" name="Maven: samtools:htsjdk:1.120.1620" level="project" />
+ <orderEntry type="library" name="Maven: org.xerial.snappy:snappy-java:1.0.3-rc3" level="project" />
+ <orderEntry type="library" name="Maven: picard:picard:1.120.1579" level="project" />
+ <orderEntry type="library" name="Maven: org.apache.ant:ant:1.8.2" level="project" />
+ <orderEntry type="module-library">
+ <library name="Maven: com.sun:tools.jar:1.5">
+ <CLASSES>
+ <root url="jar:///usr/lib/jvm/java-1.7.0-openjdk-amd64/lib/tools.jar!/" />
+ </CLASSES>
+ <JAVADOC />
+ <SOURCES />
+ </library>
+ </orderEntry>
+ <orderEntry type="library" name="Maven: colt:colt:1.2.0" level="project" />
+ <orderEntry type="library" name="Maven: concurrent:concurrent:1.3.4" level="project" />
+ <orderEntry type="library" name="Maven: it.unimi.dsi:fastutil:6.5.3" level="project" />
+ <orderEntry type="library" name="Maven: org.simpleframework:simple-xml:2.0.4" level="project" />
+ <orderEntry type="library" name="Maven: stax:stax-api:1.0.1" level="project" />
+ <orderEntry type="library" name="Maven: stax:stax:1.2.0" level="project" />
+ <orderEntry type="library" name="Maven: org.reflections:reflections:0.9.9-RC1" level="project" />
+ <orderEntry type="library" name="Maven: org.javassist:javassist:3.16.1-GA" level="project" />
+ <orderEntry type="library" name="Maven: dom4j:dom4j:1.6.1" level="project" />
+ <orderEntry type="library" name="Maven: xml-apis:xml-apis:1.0.b2" level="project" />
+ <orderEntry type="library" name="Maven: org.slf4j:slf4j-log4j12:1.6.1" level="project" />
+ <orderEntry type="library" name="Maven: org.slf4j:slf4j-api:1.6.1" level="project" />
+ <orderEntry type="library" name="Maven: org.freemarker:freemarker:2.3.18" level="project" />
+ <orderEntry type="library" name="Maven: org.apache.commons:commons-jexl:2.1.1" level="project" />
+ <orderEntry type="library" name="Maven: commons-logging:commons-logging:1.1.1" level="project" />
+ <orderEntry type="library" name="Maven: commons-lang:commons-lang:2.5" level="project" />
+ <orderEntry type="library" name="Maven: commons-io:commons-io:2.1" level="project" />
+ <orderEntry type="library" name="Maven: commons-collections:commons-collections:3.2.1" level="project" />
+ <orderEntry type="library" name="Maven: org.apache.commons:commons-math:2.2" level="project" />
+ <orderEntry type="library" name="Maven: net.java.dev.jna:jna:3.2.7" level="project" />
+ <orderEntry type="library" name="Maven: net.java.dev.jets3t:jets3t:0.8.1" level="project" />
+ <orderEntry type="library" name="Maven: commons-codec:commons-codec:1.3" level="project" />
+ <orderEntry type="library" name="Maven: commons-httpclient:commons-httpclient:3.1" level="project" />
+ <orderEntry type="library" name="Maven: com.jamesmurty.utils:java-xmlbuilder:0.4" level="project" />
+ <orderEntry type="library" name="Maven: us.levk:drmaa-gridengine:6.2u5" level="project" />
+ <orderEntry type="library" name="Maven: us.levk:drmaa-common:1.0" level="project" />
+ <orderEntry type="library" name="Maven: com.google.code.gson:gson:2.2.2" level="project" />
+ <orderEntry type="library" name="Maven: org.apache.httpcomponents:httpclient:4.1.1" level="project" />
+ <orderEntry type="library" name="Maven: org.apache.httpcomponents:httpcore:4.1" level="project" />
+ <orderEntry type="library" name="Maven: com.google.code.cofoja:cofoja:1.0-r139" level="project" />
+ <orderEntry type="library" name="Maven: io.argonaut:argonaut_2.11:6.1-M4" level="project" />
+ <orderEntry type="library" name="Maven: org.scalaz:scalaz-core_2.11:7.1.0" level="project" />
+ <orderEntry type="library" name="Maven: org.scala-lang.modules:scala-parser-combinators_2.11:1.0.2" level="project" />
+ <orderEntry type="library" name="Maven: org.scala-lang.modules:scala-xml_2.11:1.0.2" level="project" />
+ <orderEntry type="library" name="Maven: com.github.julien-truffaut:monocle-core_2.11:0.5.0" level="project" />
+ <orderEntry type="library" name="Maven: org.biojava:biojava3-core:3.1.0" level="project" />
+ <orderEntry type="library" name="Maven: org.biojava:biojava3-sequencing:3.1.0" level="project" />
+ <orderEntry type="library" name="Maven: com.google.guava:guava:18.0" level="project" />
+ <orderEntry type="library" name="Maven: com.github.scopt:scopt_2.10:3.2.0" level="project" />
+ </component>
+</module>
\ No newline at end of file
diff --git a/public/gentrap/Gentrap.iml b/public/gentrap/Gentrap.iml
index 6a01a31efae98b20b779595740810834e2906ddf..ce32544041bc11201b6adb03a31709dc78703bff 100644
--- a/public/gentrap/Gentrap.iml
+++ b/public/gentrap/Gentrap.iml
@@ -91,5 +91,6 @@
<orderEntry type="module" module-name="Mapping" />
<orderEntry type="module" module-name="Flexiprep" />
<orderEntry type="module" module-name="BamMetrics" />
+ <orderEntry type="module" module-name="Bam2Wig" />
</component>
</module>
\ No newline at end of file
diff --git a/public/mapping/Mapping.iml b/public/mapping/Mapping.iml
index 3c5b2a63e2c9e3a463b31b233962a829d764566e..ad454f7eaf2f6072be40ed6cb50f81cb484b49d2 100644
--- a/public/mapping/Mapping.iml
+++ b/public/mapping/Mapping.iml
@@ -90,5 +90,6 @@
<orderEntry type="library" name="Maven: com.github.scopt:scopt_2.10:3.2.0" level="project" />
<orderEntry type="module" module-name="Flexiprep" />
<orderEntry type="module" module-name="BamMetrics" />
+ <orderEntry type="module" module-name="Bam2Wig" />
</component>
</module>
\ No newline at end of file
diff --git a/public/sage/Sage.iml b/public/sage/Sage.iml
index 6a01a31efae98b20b779595740810834e2906ddf..ce32544041bc11201b6adb03a31709dc78703bff 100644
--- a/public/sage/Sage.iml
+++ b/public/sage/Sage.iml
@@ -91,5 +91,6 @@
<orderEntry type="module" module-name="Mapping" />
<orderEntry type="module" module-name="Flexiprep" />
<orderEntry type="module" module-name="BamMetrics" />
+ <orderEntry type="module" module-name="Bam2Wig" />
</component>
</module>
\ No newline at end of file
diff --git a/public/yamsvp/Yamsvp.iml b/public/yamsvp/Yamsvp.iml
index 6a01a31efae98b20b779595740810834e2906ddf..ce32544041bc11201b6adb03a31709dc78703bff 100644
--- a/public/yamsvp/Yamsvp.iml
+++ b/public/yamsvp/Yamsvp.iml
@@ -91,5 +91,6 @@
<orderEntry type="module" module-name="Mapping" />
<orderEntry type="module" module-name="Flexiprep" />
<orderEntry type="module" module-name="BamMetrics" />
+ <orderEntry type="module" module-name="Bam2Wig" />
</component>
</module>
\ No newline at end of file