diff --git a/public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/CombineReads.scala b/public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/CombineReads.scala index f8cddedfd99753443787f858e294258cea292665..2944fb22e1eaac8aea8587073f068d3f41744b52 100644 --- a/public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/CombineReads.scala +++ b/public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/CombineReads.scala @@ -53,7 +53,7 @@ class CombineReads(val root: Configurable) extends QScript with SummaryQScript w cutadapt.fastq_input = flash.combinedFastq cutadapt.fastq_output = this.combinedFastq cutadapt.stats_output = swapExt(outputDir, cutadapt.fastq_output, ".fastq.gz", ".stats") - cutadapt.opt_anywhere ++= (forwardPrimers ::: reversePrimers) + (forwardPrimers ::: reversePrimers).foreach(cutadapt.opt_anywhere += _) add(cutadapt) addSummarizable(cutadapt, "cutadapt") }