From 32566c23d28ac01ceddc7af08d015adb7d4c5bac Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Fri, 6 May 2016 15:37:56 +0200
Subject: [PATCH] Fixed file name
---
.../main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/carp/src/main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala b/carp/src/main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala
index 8d3e47bdd..d6b0f8c1d 100644
--- a/carp/src/main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala
+++ b/carp/src/main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala
@@ -58,7 +58,7 @@ class Carp(val root: Configurable) extends QScript with MultisampleMappingTrait
override def makeSample(id: String) = new Sample(id)
class Sample(sampleId: String) extends super.Sample(sampleId) {
- override def preProcessBam = Some(createFile(".filter.bam"))
+ override def preProcessBam = Some(createFile("filter.bam"))
val controls: List[String] = config("control", default = Nil)
--
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