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biopet.biopet
Commits
2d9ade1e
Commit
2d9ade1e
authored
Sep 28, 2016
by
Peter van 't Hof
Browse files
Added testing to pipeline summary values
parent
81e75fbd
Changes
1
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Inline
Side-by-side
basty/src/test/scala/nl/lumc/sasc/biopet/pipelines/basty/BastyTest.scala
View file @
2d9ade1e
...
...
@@ -89,6 +89,9 @@ class BastyTest extends TestNGSuite with Matchers {
pipeline
.
summarySettings
.
get
(
"boot_runs"
)
shouldBe
Some
(
bootRuns
.
getOrElse
(
100
))
pipeline
.
summaryFile
shouldBe
new
File
(
BastyTest
.
outputDir
,
"Basty.summary.json"
)
pipeline
.
summaryFiles
shouldBe
Map
()
pipeline
.
samples
foreach
{
case
(
sampleId
,
sample
)
=>
sample
.
summarySettings
shouldBe
Map
()
...
...
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