diff --git a/public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaSvCalling.scala b/public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaSvCalling.scala
index 13772de16ee6277536c56274ff5ff965765b3fde..d65c2dfd49f8632b0062d06ac78251caa502f773 100644
--- a/public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaSvCalling.scala
+++ b/public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaSvCalling.scala
@@ -43,7 +43,7 @@ class ShivaSvCalling(val root: Configurable) extends QScript with SummaryQScript
   }
 
   /** Variantcallers requested by the config */
-  protected val configCallers: Set[String] = config("sv_callers", default = Set("breakdancer", "clever", "delly", "pindel"))
+  protected val configCallers: Set[String] = config("sv_callers", default = Set("breakdancer", "clever", "delly"))
 
   /** This will add jobs for this pipeline */
   def biopetScript(): Unit = {