Commit 22344aa7 authored by Sander Bollen's avatar Sander Bollen

make it not set2

parent 11dbe4d5
......@@ -434,18 +434,18 @@ object VcfStats extends ToolCommand {
buffer += "QUAL" -> Map("not set" -> 1)
addToBuffer("SampleDistribution-Het", 0, found = false)
addToBuffer("SampleDistribution-HetNonRef", 0, found = false)
addToBuffer("SampleDistribution-Hom", 0, found = false)
addToBuffer("SampleDistribution-HomRef", 0, found = false)
addToBuffer("SampleDistribution-HomVar", 0, found = false)
addToBuffer("SampleDistribution-Mixed", 0, found = false)
addToBuffer("SampleDistribution-NoCall", 0, found = false)
addToBuffer("SampleDistribution-NonInformative", 0, found = false)
addToBuffer("SampleDistribution-Available", 0, found = false)
addToBuffer("SampleDistribution-Called", 0, found = false)
addToBuffer("SampleDistribution-Filtered", 0, found = false)
addToBuffer("SampleDistribution-Variant", 0, found = false)
addToBuffer("SampleDistribution-Het", "not set", found = false)
addToBuffer("SampleDistribution-HetNonRef", "not set", found = false)
addToBuffer("SampleDistribution-Hom", "not set", found = false)
addToBuffer("SampleDistribution-HomRef", "not set", found = false)
addToBuffer("SampleDistribution-HomVar", "not set", found = false)
addToBuffer("SampleDistribution-Mixed", "not set", found = false)
addToBuffer("SampleDistribution-NoCall", "not set", found = false)
addToBuffer("SampleDistribution-NonInformative", "not set", found = false)
addToBuffer("SampleDistribution-Available", "not set", found = false)
addToBuffer("SampleDistribution-Called", "not set", found = false)
addToBuffer("SampleDistribution-Filtered", "not set", found = false)
addToBuffer("SampleDistribution-Variant", "not set", found = false)
addToBuffer("general", "Total", found = true)
addToBuffer("general", "Biallelic", false)
......
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