Commit 1eaad60f authored by bow's avatar bow
Browse files

Fix missing path separator in Flexiprep output

parent 7188f415
...@@ -155,7 +155,7 @@ class Fastqc(root: Configurable) extends nl.lumc.sasc.biopet.extensions.Fastqc(r ...@@ -155,7 +155,7 @@ class Fastqc(root: Configurable) extends nl.lumc.sasc.biopet.extensions.Fastqc(r
"fastqc_data" -> "fastqc_data.txt") "fastqc_data" -> "fastqc_data.txt")
.map { .map {
case (name, relPath) => case (name, relPath) =>
name -> Map("path" -> (outputDir + relPath)) name -> Map("path" -> (outputDir + File.pathSeparator + relPath))
} }
ConfigUtils.mapToJson(outputMap) ConfigUtils.mapToJson(outputMap)
......
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