Commit 1c669861 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix arg parsing

parent 70865194
......@@ -66,8 +66,8 @@ object VcfFilter extends ToolCommand {
c.copy(minSamplesPass = x) }
opt[Int]("minBamAlternateDepth") unbounded() action { (x, c) =>
c.copy(minBamAlternateDepth = x) }
opt[Boolean]("filterRefCalls") unbounded() action { (x, c) =>
c.copy(filterRefCalls = x) }
opt[Unit]("filterRefCalls") unbounded() action { (x, c) =>
c.copy(filterRefCalls = true) }
}
/**
......
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