Skip to content
GitLab
Menu
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
Mirrors
biopet.biopet
Commits
10385625
Commit
10385625
authored
Mar 13, 2017
by
Peter van 't Hof
Browse files
Format fix
parent
f1cf26d5
Changes
1
Show whitespace changes
Inline
Side-by-side
shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaReport.scala
View file @
10385625
...
...
@@ -106,13 +106,13 @@ trait ShivaReportTrait extends MultisampleMappingReportTrait {
/** Files page, can be used general or at sample level */
//TODO: fix files pages
// override def filesPage(sampleId: Option[Int] = None, libraryId: Option[Int] = None): ReportPage = {
// val vcfFilesSection = if (variantcallingExecuted) List("VCF files" -> ReportSection("/nl/lumc/sasc/biopet/pipelines/shiva/outputVcfFiles.ssp",
// Map("sampleId" -> sampleId)))
// else Nil
// val oldPage = super.filesPage(sampleId, libraryId)
// oldPage.copy(sections = oldPage.sections ++ vcfFilesSection)
// }
// override def filesPage(sampleId: Option[Int] = None, libraryId: Option[Int] = None): ReportPage = {
// val vcfFilesSection = if (variantcallingExecuted) List("VCF files" -> ReportSection("/nl/lumc/sasc/biopet/pipelines/shiva/outputVcfFiles.ssp",
// Map("sampleId" -> sampleId)))
// else Nil
// val oldPage = super.filesPage(sampleId, libraryId)
// oldPage.copy(sections = oldPage.sections ++ vcfFilesSection)
// }
/** Single sample page */
override
def
samplePage
(
sampleId
:
Int
,
args
:
Map
[
String
,
Any
])
:
ReportPage
=
{
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment