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Commit 10385625 authored by Peter van 't Hof's avatar Peter van 't Hof
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Format fix

parent f1cf26d5
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shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaReport.scala
View file @ 10385625
...@@ -106,13 +106,13 @@ trait ShivaReportTrait extends MultisampleMappingReportTrait { ...@@ -106,13 +106,13 @@ trait ShivaReportTrait extends MultisampleMappingReportTrait {
/** Files page, can be used general or at sample level */ /** Files page, can be used general or at sample level */
//TODO: fix files pages //TODO: fix files pages
// override def filesPage(sampleId: Option[Int] = None, libraryId: Option[Int] = None): ReportPage = { // override def filesPage(sampleId: Option[Int] = None, libraryId: Option[Int] = None): ReportPage = {
// val vcfFilesSection = if (variantcallingExecuted) List("VCF files" -> ReportSection("/nl/lumc/sasc/biopet/pipelines/shiva/outputVcfFiles.ssp", // val vcfFilesSection = if (variantcallingExecuted) List("VCF files" -> ReportSection("/nl/lumc/sasc/biopet/pipelines/shiva/outputVcfFiles.ssp",
// Map("sampleId" -> sampleId))) // Map("sampleId" -> sampleId)))
// else Nil // else Nil
// val oldPage = super.filesPage(sampleId, libraryId) // val oldPage = super.filesPage(sampleId, libraryId)
// oldPage.copy(sections = oldPage.sections ++ vcfFilesSection) // oldPage.copy(sections = oldPage.sections ++ vcfFilesSection)
// } // }
/** Single sample page */ /** Single sample page */
override def samplePage(sampleId: Int, args: Map[String, Any]): ReportPage = { override def samplePage(sampleId: Int, args: Map[String, Any]): ReportPage = {
......
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