diff --git a/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala b/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala index 1e6fb92d648513efc31a54be728b97776c547603..2c5f1d5d815b4437e99994a192c4d162065a3825 100644 --- a/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala +++ b/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala @@ -197,8 +197,8 @@ object GentrapTest { copyFile("ref.fa.fai") val executables = Map( + "reference" -> (outputDir + File.separator + "ref.fa"), "reference_fasta" -> (outputDir + File.separator + "ref.fa"), - "dict" -> "test", "refFlat" -> "test", "annotation_gtf" -> "test", "annotation_bed" -> "test",