diff --git a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/summary/WriteSummary.scala b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/summary/WriteSummary.scala index 9311579649ff63ade803e4870f221b70c0885d44..cf117f9ad5df89bb1f46c6ed4dfdeadf720ad994 100644 --- a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/summary/WriteSummary.scala +++ b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/summary/WriteSummary.scala @@ -22,11 +22,11 @@ import scala.io.Source import org.broadinstitute.gatk.queue.function.{ QFunction, InProcessFunction } import org.broadinstitute.gatk.utils.commandline.{ Output, Input } +import nl.lumc.sasc.biopet.{ LastCommitHash, Version } import nl.lumc.sasc.biopet.core.{ BiopetJavaCommandLineFunction, BiopetCommandLineFunction, BiopetCommandLineFunctionTrait, SampleLibraryTag } import nl.lumc.sasc.biopet.core.config.Configurable import nl.lumc.sasc.biopet.utils.ConfigUtils - /** * Created by pjvan_thof on 2/14/15. */ @@ -106,9 +106,13 @@ class WriteSummary(val root: Configurable) extends InProcessFunction with Config (v1: Any, v2: Any, key: String) => summarizable.resolveSummaryConflict(v1, v2, key)) }).foldRight(pipelineMap)((a, b) => ConfigUtils.mergeMaps(a._1, b, a._2)) - val combinedMap = (for (qscript <- qscript.summaryQScripts) yield { - ConfigUtils.fileToConfigMap(qscript.summaryFile) - }).foldRight(jobsMap)((a, b) => ConfigUtils.mergeMaps(a, b)) + val combinedMap = Map("meta" -> Map( + "last_commit_hash" -> LastCommitHash, + "pipeline_version" -> Version + )) ++ + (for (qscript <- qscript.summaryQScripts) yield { + ConfigUtils.fileToConfigMap(qscript.summaryFile) + }).foldRight(jobsMap)((a, b) => ConfigUtils.mergeMaps(a, b)) val writer = new PrintWriter(out) writer.println(ConfigUtils.mapToJson(combinedMap).spaces4)