Commit 06b90a21 authored by Sander Bollen's avatar Sander Bollen
Browse files

more spelling mistakes

parent 0cf7e495
...@@ -93,7 +93,7 @@ trait BiopetQScript extends Configurable with GatkLogging { qscript: QScript => ...@@ -93,7 +93,7 @@ trait BiopetQScript extends Configurable with GatkLogging { qscript: QScript =>
if (outputDir.getParentFile.canWrite || (outputDir.exists && outputDir.canWrite)) if (outputDir.getParentFile.canWrite || (outputDir.exists && outputDir.canWrite))
globalConfig.writeReport(qSettings.runName, new File(outputDir, ".log/" + qSettings.runName)) globalConfig.writeReport(qSettings.runName, new File(outputDir, ".log/" + qSettings.runName))
else Logging.addError("Parent of output dir: '" + outputDir.getParent + "' is not writeable, outputdir can not be created") else Logging.addError("Parent of output dir: '" + outputDir.getParent + "' is not writeable, output directory cannot be created")
inputFiles.foreach { i => inputFiles.foreach { i =>
if (!i.file.exists()) Logging.addError(s"Input file does not exist: ${i.file}") if (!i.file.exists()) Logging.addError(s"Input file does not exist: ${i.file}")
......
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