Fix compile error

biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/VcfFilter.scala

@@ -259,7 +259,7 @@ object VcfFilter extends ToolCommand {
 
   /** Checks if all samples are a variant */
   def allSamplesVariant(record: VariantContext): Boolean = {
-    record.getGenotypes.forall(g=> !g.isNonInformative && g.getAlleles.exists(a => a.isNonReference && !a.isNoCall))
+    record.getGenotypes.forall(g => !g.isNonInformative && g.getAlleles.exists(a => a.isNonReference && !a.isNoCall))
   }
 
   /** returns true when DP INFO field is atleast the given value */

biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/VcfFilterTest.scala

@@ -77,7 +77,7 @@ class VcfFilterTest extends TestNGSuite with MockitoSugar with Matchers {
       "--mustHaveGenotype", "Sample_101:HET")
     main(arguments)
 
-    val size = new VCFFileReader(new File(tmpPath), false).size
+    val size = new VCFFileReader(tmp, false).size
     size shouldBe 1
 
     val tmp2 = File.createTempFile("VcfFilter", ".vcf.gz")