From 00d79a417262d25232d7e2cc3a0252f8be80e917 Mon Sep 17 00:00:00 2001
From: Peter van 't Hof <p.j.van_t_hof@lumc.nl>
Date: Wed, 19 Aug 2015 15:45:31 +0200
Subject: [PATCH] Changed order of input
---
.../main/scala/nl/lumc/sasc/biopet/tools/RegionAfCount.scala | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/RegionAfCount.scala b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/RegionAfCount.scala
index f7c4324d2..51cfd8e38 100644
--- a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/RegionAfCount.scala
+++ b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/RegionAfCount.scala
@@ -47,7 +47,7 @@ object RegionAfCount extends ToolCommand {
c.copy(outputFile = x)
}
opt[File]('V', "vcfFile") unbounded () minOccurs 1 action { (x, c) =>
- c.copy(vcfFiles = x :: c.vcfFiles)
+ c.copy(vcfFiles = c.vcfFiles ::: x :: Nil )
}
}
--
GitLab