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  • bow's avatar
    Merge branch 'develop' into feature-gentrap · f1441306
    bow authored 
    Conflicts:
	public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/Tophat.scala
	public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/CollectAlignmentSummaryMetrics.scala
	public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/CollectInsertSizeMetrics.scala
	public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/MarkDuplicates.scala
	public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/Picard.scala
    f1441306