log4j.properties 1003 Bytes
Newer Older
1
2
3
4
5
6
7
8
9
10
#
# Biopet is built on top of GATK Queue for building bioinformatic
# pipelines. It is mainly intended to support LUMC SHARK cluster which is running
# SGE. But other types of HPC that are supported by GATK Queue (such as PBS)
# should also be able to execute Biopet tools and pipelines.
#
# Copyright 2014 Sequencing Analysis Support Core - Leiden University Medical Center
#
# Contact us at: sasc@lumc.nl
#
11
# A dual licensing mode is applied. The source code within this project is freely available for non-commercial use under an AGPL
12
13
14
15
# license; For commercial users or users who do not want to follow the AGPL
# license, please contact us to obtain a separate license.
#

16
# Set root logger level to DEBUG and its only appender to A1.
17
log4j.rootLogger=FATAL, A1
18
19
20
21
22
23
24

# A1 is set to be a ConsoleAppender.
log4j.appender.A1=org.apache.log4j.ConsoleAppender

# A1 uses PatternLayout.
log4j.appender.A1.layout=org.apache.log4j.PatternLayout
log4j.appender.A1.layout.ConversionPattern=%-5p [%d] [%C{1}] - %m%n