SeqStat.md 565 Bytes
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# SeqStat

## Introduction
 

## Example
The help menu:
~~~


SeqStat - Summarize FastQ
      
Usage: SeqStat [options]

  -l <value> | --log_level <value>
        Level of log information printed. Possible levels: 'debug', 'info', 'warn', 'error'
  -h | --help
        Print usage
  -v | --version
        Print version
  -i <fastq> | --fastq <fastq>
        FastQ file to generate stats from
  -o <json> | --output <json>
        File to write output to, if not supplied output go to stdout


~~~

To run the tool use:
~~~
biopet tool SeqStat    
~~~


## Output