1. 01 Oct, 2019 1 commit
  2. 28 Aug, 2019 1 commit
  3. 06 Aug, 2019 1 commit
  4. 05 Aug, 2019 1 commit
  5. 01 Aug, 2019 2 commits
  6. 27 Nov, 2018 1 commit
  7. 13 Mar, 2018 2 commits
  8. 16 Jan, 2018 1 commit
  9. 02 Jan, 2018 1 commit
  10. 30 Nov, 2017 1 commit
    • Ivo Fokkema's avatar
      Fixed bug; The color coding was visible for the public. · 21bc952c
      Ivo Fokkema authored
      - Color coding based on the variant's status should not be shown to the public, also because they don't see the status column.
      - Made sure the color coding was done only for users >= LEVEL_COLLABORATOR.
      - Also made sure the color coding logic was in one place only, instead of copied in many different files.
      - Color coding is based on the lowest set status (unique variant view and view with variant and patient data in one row).
      21bc952c
  11. 09 Nov, 2017 1 commit
    • mkroon's avatar
      Rename column attribute for find&replace. Misc doc changes. · 178dc581
      mkroon authored
      * Note (in code comments) that errors from find & replace may have a
        different order than viewlist records.
      * Rename qualifier "allowfnr" to easier recognizable name
        "allow_find_replace".
      * Updated code documentation.
      178dc581
  12. 29 Sep, 2017 2 commits
  13. 28 Sep, 2017 2 commits
  14. 20 Sep, 2017 1 commit
    • mkroon's avatar
      New variant effect IDs "#" and "+*". · 6d542683
      mkroon authored
      * Added new codes and descriptions to $_SETT['var_effect'].
      * Updated legend in 3 viewlists.
      * Modified submitter test to use new effect ID.
      * New way of generating reported/concluded effect symbol combinations.
      * Added new effect symbol combinations to SQL upgrade.
      6d542683
  15. 19 Jun, 2017 1 commit
  16. 15 May, 2017 1 commit
    • Ivo Fokkema's avatar
      Updated all NCBI links to use HTTPS since using HTTP broke things sometimes. · e3d5fbf2
      Ivo Fokkema authored
      - The Reference Sequence parser couldn't fetch the GenBank file over a proxy with the NCBI's HTTP to HTTPS redirect in place. Updating the URL to HTTP fixed the problem.
      - Fixed all links to HTTPS to match.
      - Also fixed a bug in the Reference Sequence Parser with the parsing of the GenBank ID; this problem was introduced in the recent fix.
      e3d5fbf2
  17. 25 Jan, 2017 1 commit
  18. 13 Jan, 2017 2 commits
  19. 14 Dec, 2016 1 commit
  20. 07 Dec, 2016 1 commit
  21. 01 Nov, 2016 1 commit
    • Ivo Fokkema's avatar
      Imported minor changes from LOVD+, not affecting LOVD3 behavior. · 51c5036c
      Ivo Fokkema authored
      - The code bases of LOVD3 and LOVD+ are brought closer together.
      - Introduced the LOVD_plus constant, which tells the code base whether this is an LOVD3 or LOVD+ installation.
      - Some changes specifically for LOVD+ are introduced in the LOVD3 code base, only active when LOVD_plus is set to true.
      - These changes are mostly cosmetic, but decrease the differences between LOVD3 and LOVD+, making it easier to share improvements.
      - Introduced changes:
        - Minimum user level needed for submitting data or seeing non-public data is now configurable, and is different for LOVD+.
        - LOVD+ has a different logo, and has submitter registration disabled by default.
      51c5036c
  22. 27 Sep, 2016 1 commit
  23. 26 Sep, 2016 1 commit
  24. 22 Sep, 2016 1 commit
  25. 13 Sep, 2016 1 commit
    • Ivo Fokkema's avatar
      Updated functions list. · 80195b38
      Ivo Fokkema authored
      - Also updated comments here and there where they interfered with my code to create the list of functions in LOVD.
      - Fixed coding style here and there.
      80195b38
  26. 09 Sep, 2016 3 commits
  27. 08 Sep, 2016 2 commits
  28. 07 Sep, 2016 1 commit
    • Ivo Fokkema's avatar
      Minor changes. · 0eedaa48
      Ivo Fokkema authored
      - Coding style fixes.
      - Some code simplifications.
      - Removed duplicate changelog entries.
      0eedaa48
  29. 02 Sep, 2016 3 commits
  30. 01 Sep, 2016 1 commit