Commit c6821115 authored by Sander Bollen's avatar Sander Bollen

add example json

parent d0006b92
Pipeline #2574 passed with stage
in 1 minute and 31 seconds
...@@ -26,8 +26,8 @@ file, and a VCF file containing all the filtered-out variants. ...@@ -26,8 +26,8 @@ file, and a VCF file containing all the filtered-out variants.
#### Configuration #### Configuration
Configuration of filters goes by a little JSON file. See [here]() for an Configuration of filters goes by a little JSON file.
example, and [here]() for the json schema. See [here](cfg/example-filter.json) for an example.
#### Usage #### Usage
......
{
"canonical_chromosomes": true,
"gq_pass": 7,
"index_called": true,
"low_gnomad_af": 0.05,
"low_gonl_af": null,
"gnomad_vcf": "/path/to/vcf",
"gonl_vcf": null
}
\ No newline at end of file
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