diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 0000000000000000000000000000000000000000..8b950e38a5ddb3fb1c0e072c52c419f6156d87d7 --- /dev/null +++ b/Dockerfile @@ -0,0 +1,8 @@ +FROM debian:buster-slim + +RUN apt update && apt install python3-pip python3-dev cython3 zlib1g-dev python3-numpy libssl-dev python3-setuptools -y +RUN apt install -y libcurl4-openssl-dev +RUN apt install -y libbz2-dev liblzma-dev +COPY . vtools + +RUN cd vtools && pip3 install . diff --git a/setup.py b/setup.py index df61d13f15e139efeb86e9c513c0455545aebe80..8ef7fab8592db5a8764037efeb4fe10d7d255418 100644 --- a/setup.py +++ b/setup.py @@ -16,7 +16,7 @@ with open(readme_file) as desc_handle: setup( name="v-tools", - version="1.0.0-dev", + version="1.1.0-dev", description="Various tools operating over VCF files", long_description=long_desc, author="Sander Bollen", @@ -31,7 +31,7 @@ setup( python_requires=">=3.6", zip_safe=False, include_package_data=True, - setup_requires=["cython"], + setup_requires=["cython", "numpy"], install_requires=[ "click", "cyvcf2",