diff --git a/vtools/cli.py b/vtools/cli.py index f0079b2b6541669687a96c9c74e8f7587ed12796..37ea32f78db3e7ed2b712167f4a73cf9bd561579 100644 --- a/vtools/cli.py +++ b/vtools/cli.py @@ -52,7 +52,7 @@ def evaluate_cli(call_vcf, positive_vcf, call_samples, positive_samples, print(json.dumps(st)) else: with click.open_file(stats, 'w') as fout: - print(json.dumps(st), file=fout) + fout.write(json.dumps(st)) # If there were discordand records, and a discordant-vcf should be written if len(disc) > 0 and discordant_vcf: