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  • van den Berg's avatar
    Add test cases where the ALT and REF differ · b63f7cb0
    van den Berg authored
    The actual genotypes are the same between gatk.vcf and
    gatk_ref_alt_changed.vcf, but the REF, ALT and corresponding genotype
    calls differ. This is to test if the conversion of genotype call
    (e.g. 1/3) to the actual genotype (e.g. A/T) is working as intended.
    b63f7cb0