- 17 Dec, 2020 5 commits
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van den Berg authored
Fix tests See merge request !5
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van den Berg authored
This is done to work around a bug in the latest version of pytest-workflow, https://github.com/LUMC/pytest-workflow/issues/122
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van den Berg authored
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van den Berg authored
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van den Berg authored
Sending the coverage data to varda was run as a local rule, which caused the SGE cluster to kill the wrapper script when there were many samples. This commit removes the local rule so that the jobs to submit the data to varda are submitted to the cluster as well.
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- 02 Nov, 2020 4 commits
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van den Berg authored
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van den Berg authored
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van den Berg authored
- 14 Oct, 2020 1 commit
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van den Berg authored
Use latest version of varda2-client. See merge request !3
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- 13 Oct, 2020 1 commit
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Santcroos authored
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- 20 May, 2020 2 commits
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The first step of the pipeline is to use bcftools to filter alt alleles that are not present in any of the called genotypes, and to remove the alt alleles of genotypes that are uncalled.
- 14 May, 2020 2 commits
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van den Berg authored
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van den Berg authored
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- 09 May, 2020 2 commits
- 08 May, 2020 1 commit
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Santcroos authored
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- 06 May, 2020 1 commit
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Santcroos authored
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- 04 May, 2020 1 commit
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Santcroos authored
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- 03 May, 2020 9 commits
- 02 May, 2020 6 commits
- 01 May, 2020 2 commits
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Santcroos authored
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van den Berg authored
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