From b6ec5dae40828e338ce9642dc835cfc036570176 Mon Sep 17 00:00:00 2001
From: Redmar van den Berg <RedmarvandenBerg@lumc.nl>
Date: Thu, 14 May 2020 16:54:49 +0200
Subject: [PATCH] Add gitlab-ci file

---
 .gitlab-ci.yml | 28 ++++++++++++++++++++++++++++
 1 file changed, 28 insertions(+)
 create mode 100644 .gitlab-ci.yml

diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
new file mode 100644
index 0000000..10799da
--- /dev/null
+++ b/.gitlab-ci.yml
@@ -0,0 +1,28 @@
+variables:
+  GIT_SUBMODULE_STRATEGY: recursive
+
+.before_script_anchor: &before_script_anchor
+  before_script:
+    - pip3 install pytest-workflow
+
+stages:
+  - sanity
+  - dry-run
+
+test-sanity:
+  <<: *before_script_anchor
+  script:
+    - pytest --tag sanity
+  image: lumc/singularity-snakemake:3.5.2-5.15.0
+  tags:
+    - docker
+  stage: sanity
+
+test-dry-run:
+  <<: *before_script_anchor
+  script:
+    - pytest --tag dry-run
+  image: lumc/singularity-snakemake:3.5.2-5.15.0
+  tags:
+    - docker
+  stage: dry-run
-- 
GitLab