From 2cdb8511b7b0034903a7cadd003e8bc1aca11daa Mon Sep 17 00:00:00 2001
From: Redmar van den Berg <RedmarvandenBerg@lumc.nl>
Date: Fri, 15 May 2020 09:09:16 +0200
Subject: [PATCH] Add integration test
---
.gitlab-ci.yml | 10 ++++++++++
1 file changed, 10 insertions(+)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 2a702d4..de186e4 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -16,6 +16,7 @@ variables:
stages:
- sanity
- dry-run
+ - integration
test-sanity:
<<: *before_script_anchor
@@ -34,3 +35,12 @@ test-dry-run:
tags:
- docker
stage: dry-run
+
+test-integration:
+ <<: *slurm_before_script_anchor
+ script:
+ - pytest --keep-workflow-wd-on-fail --basetemp ${BASETEMP} --tag integration
+ image: lumc/singularity-snakemake:3.5.2-5.15.0
+ tags:
+ - slurm
+ stage: integration
--
GitLab