Commit fef1b927 authored by Sander Bollen's avatar Sander Bollen
Browse files

emulate truncate with head -c 0

parent 2a5d61bb
Pipeline #2579 canceled with stages
in 1 minute and 39 seconds
......@@ -26,13 +26,13 @@ odir=${5}
fastqc --nogroup -o ${odir} ${input_r1} ${input_r2}
if [[ -f ${output_r1} ]]; then
unzip -l ${output_r1} || truncate -s0 ${output_r1}
unzip -l ${output_r1} || head -c 0 ${output_r1} > ${output_r1}
else
touch ${output_r1}
fi
if [[ -f ${output_r2} ]]; then
unzip -l ${output_r2} || truncate -s0 ${output_r2}
unzip -l ${output_r2} || head -c 0 ${output_r2} > ${output_r2}
else
touch ${output_r2}
fi
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