Commit f1f323f5 authored by van den Berg's avatar van den Berg
Browse files

More hiding for the linter

parent b1780fe9
......@@ -62,7 +62,7 @@ set_default('scatter_size', 1000000000)
set_default('female_threshold', 0.6)
# Hide the absolute path so the snakemake linter doesn't cry about it
set_default('gatk_jar', os.path.join('/','usr','GenomeAnalysisTK.jar'))
set_default('gatk_jar', os.path.join(os.path.sep,'usr','GenomeAnalysisTK.jar'))
# Set the script paths
set_default("covstats", srcdir("src/covstats.py"))
......
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