Commit e2c4274e authored by van den Berg's avatar van den Berg
Browse files

Make sure female-threshold is a float

parent 93bdedbe
......@@ -67,7 +67,6 @@ def main(args):
unum = parse_num_file(args.unique_num)
ubnum = parse_num_file(args.usable_basenum)
cutadapt = parse_json_file(args.cutadapt)
d = {
"sample_name": args.sample_name,
......@@ -110,7 +109,7 @@ if __name__ == "__main__":
help="Unique num file")
parser.add_argument("--usable-basenum", required=True,
help="Usable basenum")
parser.add_argument("--female-threshold", default=0.6,
parser.add_argument("--female-threshold", default=0.6, type=float,
help="Female threshold of X/all cov")
parser.add_argument("--cutadapt", required=True,
help="Cutadapt summary output")
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